PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35717.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 171aa    MW: 19347.7 Da    PI: 4.5778
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.14.9e-078682990
        FAR1 29 tkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 ++++    eg++ +++++ +   ++  + +++Cka+++ + ++dg   vt + leHn el 
  PHT35717.1  8 DQYEYLSVSEGEEYDHQED-DVDDEEGIKAKVDCKARVTFHVMNDGSSIVTMVILEHNYELD 68
                4677777788888888877.88889999*******************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MNKSHQSDQY EYLSVSEGEE YDHQEDDVDD EEGIKAKVDC KARVTFHVMN DGSSIVTMVI  60
LEHNYELDPA LSRFLPYHRE LNKTLKRSFV AHDIAGLRHS KSIRLLEEKF GGPECTIAME  120
PTMSTSETLG NDATSAILAK LEAMARQWEV INEILDHIGV LREQVDCLGP L