PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT35607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 178aa MW: 20206.5 Da PI: 9.7877 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 68 | 2e-21 | 78 | 154 | 20 | 98 |
DUF573 20 idfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 id+++k++++p +d+ ++ef+kks+++++sk ql +KirrLK K+ ++ k ++gke +++k+h+qk +elskkiW++ PHT35607.1 78 IDYRSKKKADPIADLGTVHEFIKKSLHVDASKVQLQDKIRRLK-KYMNNAGK-ERGKERVLTKAHEQKEYELSKKIWDK 154 9*****************************************8.67777777.7***********************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MVGILGCGRH SGHELFTGSY LLYTILLANN GQARLEPVCT VLGKLGSCDV GIDEEYYLIN 60 LASSHMLVSK IKPCRWTIDY RSKKKADPIA DLGTVHEFIK KSLHVDASKV QLQDKIRRLK 120 KYMNNAGKER GKERVLTKAH EQKEYELSKK IWDKEKSDKW VQVEVVKVDN VAASMGMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 2e-12 | GeBP family protein |