PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT35314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 223aa MW: 25822.2 Da PI: 6.7392 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 87.4 | 1.2e-27 | 147 | 205 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++++ r+YY+C+s +C+vkk+ver+ +d +++++tYeg+Hnhe PHT35314.1 147 LDDGYKWRKYGKKKVKSNTHLRNYYKCSSGDCKVKKRVERDGNDSSYLITTYEGQHNHE 205 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MFGSSTFQET SNVTSHQYQT INPNFAFHDP LINMNQDHGH NNNKYQDFDT SFLDMLLDGG 60 DQEYYSNYSN NSYNNNVSFY SENPFMQQEI STSTYSTSGN SSTASSFDAT LTNIHMNHEN 120 SSMGIEKEKK GEKHAIAFRT KTQLEILDDG YKWRKYGKKK VKSNTHLRNY YKCSSGDCKV 180 KKRVERDGND SSYLITTYEG QHNHESPFVI YCHDEMPTSK YLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 3e-24 | WRKY family protein |