PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT35021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 176aa MW: 19688 Da PI: 4.6324 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 44.9 | 2.7e-14 | 27 | 123 | 5 | 96 |
NF-YB 5 drflPianvsrimkkvlPa...nakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 ++ lP a + r++k l + ++ +s kd+ e + fi ++++ a+d c++ kr+ in++d++ al ++ f +++epl++ l+ +re +++ PHT35021.1 27 QEGLPKAIIRRLVKDKLSQlstDSDLSllKDSLTAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEDIEFPEFIEPLRASLEGFREKKRK 123 55699999*****98876411144443338999999*********************************************************8876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence |
MGEIEKNNKD KEIEKEKAGG TTVQIEQEGL PKAIIRRLVK DKLSQLSTDS DLSLLKDSLT 60 AFSESARIFI HYLSATANDI CKESKRQIIN AEDVFKALED IEFPEFIEPL RASLEGFREK 120 KRKSSSSKSP ESNKKAKVKE PVENGKGKMK ELPSDNENED GQAGEEINEV EDSADD |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 120 | 150 | KKRKSSSSKSPESNKKAKVKEPVENGKGKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27470.1 | 3e-28 | NF-YB family protein |