PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT34935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | YABBY | ||||||||
Protein Properties | Length: 161aa MW: 18285.9 Da PI: 10.0166 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 196.2 | 1.5e-60 | 7 | 152 | 21 | 170 |
YABBY 21 ilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeev.prvppvirP 118 + vsvP +s++++vtvrCGhC++llsvn+ q+l+ ++ l++ +++ ++ ++++ +n+k +v++++s s + +++s + + e+ pr+pp irP PHT34935.1 7 CFQVSVPCSSMLTIVTVRCGHCANLLSVNIGSLLQALPFQD-LQKLQRQQYTNVEHNNASNYKGYVSSSSS---SSKFNRFSASISPEIePRIPP-IRP 100 588************************************99.56555554444444444455544444443...334445566666665266666.9** PP YABBY 119 PekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 PekrqrvPsayn+fikeeiqrikasnPdi+hreafs+aaknWahfP+ihfgl PHT34935.1 101 PEKRQRVPSAYNKFIKEEIQRIKASNPDITHREAFSTAAKNWAHFPHIHFGL 152 **************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MNAYKMCFQV SVPCSSMLTI VTVRCGHCAN LLSVNIGSLL QALPFQDLQK LQRQQYTNVE 60 HNNASNYKGY VSSSSSSSKF NRFSASISPE IEPRIPPIRP PEKRQRVPSA YNKFIKEEIQ 120 RIKASNPDIT HREAFSTAAK NWAHFPHIHF GLKLEGNMYL N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-44 | YABBY family protein |