PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT34822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 216aa MW: 25168.6 Da PI: 5.4397 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.3 | 2.3e-13 | 46 | 172 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknratksgyWkatgkdkevl 93 +G+rFhPtd e + +Lkk +++++++ + + +++d+y++ ePw++ + + + +++++ +F++++ + + g Wk + + k+v+ PHT34822.1 46 RGVRFHPTDTEGL-TFLKKFMAKQEMNDSGFiTTNIDVYDSeeEPWKIYsRgvpCGD-ADDSLFrYFITKK-----------SSNLGNWKLQSEGKPVH 131 7**********99.99*********99988834556***88668****744343222.2333431333322...........234699**********9 PP NAM 94 sk...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 + ++ ++g+kk + + +++ ++ W+m+ey+l PHT34822.1 132 RDsssSTVVMGCKKKMCYMinnNEELREDDGHYWMMKEYEL 172 9865555669*********54322333444577******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MWSMERVERM QTLALQCGGT EVVSRIGSLI ETLNSLKARN RGMEKRGVRF HPTDTEGLTF 60 LKKFMAKQEM NDSGFITTNI DVYDSEEEPW KIYSRGVPCG DADDSLFRYF ITKKSSNLGN 120 WKLQSEGKPV HRDSSSSTVV MGCKKKMCYM INNNEELRED DGHYWMMKEY ELSNVILHQF 180 DDDRRDYVLW AIKKKFIETC FSEMENVSEE FGAIQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12910.1 | 8e-06 | NAC family protein |