PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34821.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 293aa    MW: 33685.2 Da    PI: 4.8194
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.32.5e-091232493128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  Gf FhPtd   v  +L+k +++++++ + +  +++d+y++  ePw++  +   +  a ++++y ++ +          ++  + g Wk + + k+ ++
  PHT34821.1 123 SGFPFHPTDTKGV-TFLQKFMAKQEMNDSGFiTTNIDVYDLeeEPWKIYsRgvpC-GAADDSLYRYFIT----------KKCSNLGNWKLQDERKPFHR 209
                 7************.99*********99888834556**987558****7334432.3344444433332..........23345799*****9999998 PP

         NAM  95 k...kgelvglkktLvfykgrapkge...ktdWvmheyrl 128
                     ++ ++g+kk + +  +++++ +       +m+ey+l
  PHT34821.1 210 DsssSTVVIGCKKKMRYMVNNNEEHRednGHYRLMKEYKL 249
                 75555566**********4443333300023347888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MKENETLHEM MIRITALTNE LTSLGKVISD EEQVDKVLRV LPKSKWNVKV TAIREVNKDL  60
AGMTLNELVE NLRTYDMKID GTKMVAASVF DLDKDEFDEA ALMALGDSDF EEEDDASKRG  120
VSSGFPFHPT DTKGVTFLQK FMAKQEMNDS GFITTNIDVY DLEEEPWKIY SRGVPCGAAD  180
DSLYRYFITK KCSNLGNWKL QDERKPFHRD SSSSTVVIGC KKKMRYMVNN NEEHREDNGH  240
YRLMKEYKLS NVILHLFDDD RRDYVLCAIK KNFIETCSSV MDNVSVEFGT IEL