PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34680.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 368aa MW: 42943 Da PI: 6.675

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.6	1.8e-47	65	190	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG+rF P+deel+ +yLkkkv ++ l+ + ikev++yk+ P++L + +e+ewyfF++r++ky++g+r+nra+ +gyWkatg dk++++ ++ + PHT34680.1 65 PPGYRFCPHDEELIIHYLKKKVMNELLPH-DKIKEVNLYKHSPQELSeNYSMLGEREWYFFTPRNRKYPNGDRPNRAAGTGYWKATGADKPIKH-NNVK 161 9***********************999.88**********8444445899***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg +k Lvfy+g+ pkg kt+W+mhe+r+ PHT34680.1 162 VGFRKALVFYEGKPPKGDKTNWIMHEFRV 190 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MASFDEQSKA HIKASSWSTT QNPKMQEVDK QKQVVDDEKD LVVKPNYNIN TNGKRVYVDD 60 NFVFPPGYRF CPHDEELIIH YLKKKVMNEL LPHDKIKEVN LYKHSPQELS ENYSMLGERE 120 WYFFTPRNRK YPNGDRPNRA AGTGYWKATG ADKPIKHNNV KVGFRKALVF YEGKPPKGDK 180 TNWIMHEFRV NESRRLKSHA SDMRLDDWVL CRIYKKVDKS FKASRKDEHV QVDATISCSS 240 VGKVKNCDYE GIMDSCGELA RQHFELPHQY DITLDDPNFM PDYFSHYGAR SSNYGMHFQP 300 SFSPGNMYVW DHKGYQENNY LPVYFDFNNF CQDPCENIGE IESHIVLNND VNNGVLDVVD 360 ENSSIDKE

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MASFDEQSKA HIKASSWSTT QNPKMQEVDK QKQVVDDEKD LVVKPNYNIN TNGKRVYVDD  60
NFVFPPGYRF CPHDEELIIH YLKKKVMNEL LPHDKIKEVN LYKHSPQELS ENYSMLGERE  120
WYFFTPRNRK YPNGDRPNRA AGTGYWKATG ADKPIKHNNV KVGFRKALVF YEGKPPKGDK  180
TNWIMHEFRV NESRRLKSHA SDMRLDDWVL CRIYKKVDKS FKASRKDEHV QVDATISCSS  240
VGKVKNCDYE GIMDSCGELA RQHFELPHQY DITLDDPNFM PDYFSHYGAR SSNYGMHFQP  300
SFSPGNMYVW DHKGYQENNY LPVYFDFNNF CQDPCENIGE IESHIVLNND VNNGVLDVVD  360
ENSSIDKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	2e-62	NAC family protein