PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34545.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 339aa    MW: 39477.9 Da    PI: 9.8724
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.32.1e-071251763790
        FAR1  37 kegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +eg+      +     ++++r+r e r+gC a++k +   ++ wev +++  H+H++ 
  PHT34545.1 125 QEGQY-----DklspFQERKRQRLECRCGCLAHIKFQIP-NDMWEVCEFNDVHSHPMI 176
                 33333.....1444458899999*************998.9**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MSIIPIISKW HIIFSQGIKV DLLKVEAVKR CHRPTTPTDI KSFLGLPRYY RWFVEICLSV  60
AAPLTKSSKK NLSSRGSILV MHGKVLAYAF RQLKIYEKNY LTHDLELCFK SEMENVNVEK  120
DSANQEGQYD KLSPFQERKR QRLECRCGCL AHIKFQIPND MWEVCEFNDV HSHPMIEDNL  180
RHFIQSGRKL TSATKNILGS MVEKYILKRW TKNVKHGSGF EEYTKKKETV KSSMAICLNR  240
LMKVSLTVMT LADNDLDWEE IARKYLYQAK IEIIKHQSEL YAENYEKDKN KLSGTDPVTG  300
CKDQILDPIK KKNKSSGYER MKSRGEQRKK KGITKDIEI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310331KKKNKSSGYERMKSRGEQRKKK