PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34527.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 537aa MW: 59714.4 Da PI: 6.6909

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.5	3.4e-24	159	212	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+++ Lt+e+v+SHLQkYRl PHT34527.1 159 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMGIPWLTRENVASHLQKYRL 212 68*****************.9*****************************8 PP
2	Myb_DNA-binding	41.5	3.1e-13	161	211	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ PHT34527.1 161 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMGiPWLTRENVASHLQKYR 211 678***********************************************7 PP
3	Response_reg	56.5	1.5e-19	22	107	25	109
EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 25 evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +v+++ ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ PHT34527.1 22 RVTTCGLAREALYLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 107 688888899****998889******************6644.8*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MRHHSTKKEY VPVCGMYWYA GRVTTCGLAR EALYLLRERK DGFDIVISDV NMPDMDGFKL 60 LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI RMKELRNIWQ HVLRKKMQEA 120 RDVGNHELDQ YDERKDFDNK HDEKEMSEPR GVDSSSMKKA RVVWTVDLHQ KFVKAVNQIG 180 FDKVGPKKIL DLMGIPWLTR ENVASHLQKY RLYLTRLQKE NEVKASFCGV KHPDVSSKET 240 SSSLSLQNPV DVCTDVTNDK YGGVSGGKAI VQNGKSSICE SKVKVVVSVP AAEPSSVVGD 300 NFDSPAAVSK IGLNDSFGLV NTNVKNSKVP TTYCSTGEAP QPQYKQDFNQ SANGSSHQPL 360 PVVSHQIPVD HTQETCFLSH VPSREEGDRH PDTKNKPSFF KRKSEEVGKY SPIETINLFQ 420 QVSHQQANFH TLQQMASTTW TATSHNVVNG PQSSAGNLTS RSGSIVASAG EDMCGASILG 480 ECFLANNGLP NTEQFGYNDP QPISGVPTCL YDTLRFDYEY PVDSLEGIVM DQGLFIV

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MRHHSTKKEY VPVCGMYWYA GRVTTCGLAR EALYLLRERK DGFDIVISDV NMPDMDGFKL  60
LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI RMKELRNIWQ HVLRKKMQEA  120
RDVGNHELDQ YDERKDFDNK HDEKEMSEPR GVDSSSMKKA RVVWTVDLHQ KFVKAVNQIG  180
FDKVGPKKIL DLMGIPWLTR ENVASHLQKY RLYLTRLQKE NEVKASFCGV KHPDVSSKET  240
SSSLSLQNPV DVCTDVTNDK YGGVSGGKAI VQNGKSSICE SKVKVVVSVP AAEPSSVVGD  300
NFDSPAAVSK IGLNDSFGLV NTNVKNSKVP TTYCSTGEAP QPQYKQDFNQ SANGSSHQPL  360
PVVSHQIPVD HTQETCFLSH VPSREEGDRH PDTKNKPSFF KRKSEEVGKY SPIETINLFQ  420
QVSHQQANFH TLQQMASTTW TATSHNVVNG PQSSAGNLTS RSGSIVASAG EDMCGASILG  480
ECFLANNGLP NTEQFGYNDP QPISGVPTCL YDTLRFDYEY PVDSLEGIVM DQGLFIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-88	ARR-B family protein