PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34435.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 171aa    MW: 19518.4 Da    PI: 9.3625
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.0003589111123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC++Cg  Fs    L  H+r+H
  PHT34435.1  89 HKCSICGVEFSLGQALGGHMRRH 111
                 79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MTSMKRSRED YMQIEAEAMA NCALMLLSRF NNNNNISSSS TDYHHNDFEC KTCYKRFPSF  60
QALGGHRASH KRPKLAGEFL EEVKKNKMHK CSICGVEFSL GQALGGHMRR HRDETNKTSA  120
EKAMVPILKK SNSSKRIFCL DLNLTPRDDN VDDLKLWPTA PVASPVLRCF F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-40C2H2 family protein