PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT34250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 153aa MW: 16995.6 Da PI: 10.2731 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 54.1 | 3.4e-17 | 31 | 113 | 16 | 97 |
NF-YC 16 fknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 ++ +lP++r+kki+k d+d+k++ +ea l++ + elf+ l+ +s a e++r+t+k + av+r + + dfl+d p PHT34250.1 31 SHQLQLPVSRLKKIMKLDQDIKKVNSEALHLIASSTELFLESLAEKSAQVALEKNRKTVKLEHLRVAVKRHQpTSDFLLDSLP 113 56789***************************************************************9976489*****988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 153 aa Download sequence |
MSTSLSRVMD TMAGEDQEGN SIAAVAIAGE SHQLQLPVSR LKKIMKLDQD IKKVNSEALH 60 LIASSTELFL ESLAEKSAQV ALEKNRKTVK LEHLRVAVKR HQPTSDFLLD SLPMPPSQPS 120 DPSPKVQSRR RLSKDKPLPS GTRRIEAFFH NCT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43250.1 | 2e-35 | NF-YC family protein |