PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34203.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 340aa MW: 38693.9 Da PI: 4.5542

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.8	4.3e-09	284	316	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+ +q+ +WF N+R ++ PHT34203.1 284 PYPTEADKNSLAESTGLDPKQINNWFINQRKRH 316 8*****************************885 PP
2	ELK	31.2	5e-11	236	257	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrK++++L+sLk EFs PHT34203.1 236 ELKDRLLRKFGSHLSSLKLEFS 257 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MDDEMYGFRS TSDYADKALM SPENLMMADE YNNFHNYHNM AMNTPMFGSD DVQLSSDAAN 60 SFSLTTPQNN NIYQIRYGNC GSGSGSGSRK DDNNNNNEDY DEDGSNIIKA KIVSHPYYPK 120 LLDAYIDCQK VGAPPEIANL LEEIRQQNDL RKPNATSICI GADPELDEFM ETYCDILLKY 180 KSDLSRPFDE ATTFLNKIEL QLGNLCKDDG GVSSDEEFSC GEAEGQDASM RCEDNELKDR 240 LLRKFGSHLS SLKLEFSKKK KKGKLPKAAR QMLLAWWTDH YRWPYPTEAD KNSLAESTGL 300 DPKQINNWFI NQRKRHWKPS ENMQLAVMDN LSGQFFSSDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-110	TALE family protein