PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT33937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 129aa MW: 14413.8 Da PI: 10.6619 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 56.4 | 3.9e-18 | 14 | 55 | 2 | 43 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 + +n+ n tfskRr g++KKA+ELS+LC++e+a ++ s++ PHT33937.1 14 KMKNQNNLPATFSKRRDGLFKKASELSTLCGVEIATVVSSPS 55 56899999******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MRKSTGRKKI KIEKMKNQNN LPATFSKRRD GLFKKASELS TLCGVEIATV VSSPSKTSVY 60 PIGHPCVLSA VDKFLNPPPD TNSLQPLAKP YQNKDVTKME KLIEAKEKRA LRLQSTNTKG 120 SYEGLNFIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 9e-28 | M-type_MADS family protein |