PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33935.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 699aa MW: 79133.3 Da PI: 6.6474

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	38.8	2.5e-12	640	671	46	77
TSSEEETTT--SS--S-STTTT-------S-- CS SBP 46 CsrfhelsefDeekrsCrrrLakhnerrrkkq 77 rfh l efD++k+sCr++L +hner+rk++ PHT33935.1 640 LLRFHLLAEFDDGKQSCRKHLPGHNERQRKPH 671 469**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MDLLTEHLLS GKTKKVNVVV SQGRDESNSE EEDNYLNNQE GFRGNAQGNQ GQNYYDKSGY 60 KDRDQGSWKN KTDRSGLYVP PGNREAAASG SGKMSMEEMM AKLLKGVEET NMGITEVEND 120 LSSINQLVDS HCTAIKQLEQ KLSKLSVAFN QRRARTLPSD TVQNPRNDGS CMAITTRSGK 180 VLENLPKSKQ VVDDVVDNAI DADGEDAIEA GKSGHDVTPT LLQPEKNDNR KQDKKEVVEK 240 MIPLPLPHFP QKLKKKADDT SEKVDNRKQD KKEVVEKTIP LPPPPPFPQR QKKKAEDTRF 300 SKFMTMLKQL IINVPLVEAL EQMPRYAKFM KDLLTKKRAV SYELADNVHH CSAITTRSLV 360 QKKADPDFVI LDCEVDSEVP IILRRPFLGT GSVLIDLRAN ELLFWLNDEV VHFDVCKSMK 420 QPRDMNVFSI DDVYDEDEKE LSVEKQLTVE SLYDVLLNSE RKEAEEHEET VCALIGIRSY 480 SHVPKKLDLD LKNQPSPTVK TSIEEPPWLE LKELPRYVFL GIENTLPVSV ADDLSEQHVE 540 DLISALKRYK RAMGWTINDI IGVPPGIFMH KSHLKGDCMP TNSSLIDLKP GGFPDHVSAN 600 IFKYPKSMPS FTTSESIFQA KRMHQVLLVS TKAEFILDTL LRFHLLAEFD DGKQSCRKHL 660 PGHNERQRKP HIGMHSGYKL FLSFAIKVVL NFAYCSFTL

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MDLLTEHLLS GKTKKVNVVV SQGRDESNSE EEDNYLNNQE GFRGNAQGNQ GQNYYDKSGY  60
KDRDQGSWKN KTDRSGLYVP PGNREAAASG SGKMSMEEMM AKLLKGVEET NMGITEVEND  120
LSSINQLVDS HCTAIKQLEQ KLSKLSVAFN QRRARTLPSD TVQNPRNDGS CMAITTRSGK  180
VLENLPKSKQ VVDDVVDNAI DADGEDAIEA GKSGHDVTPT LLQPEKNDNR KQDKKEVVEK  240
MIPLPLPHFP QKLKKKADDT SEKVDNRKQD KKEVVEKTIP LPPPPPFPQR QKKKAEDTRF  300
SKFMTMLKQL IINVPLVEAL EQMPRYAKFM KDLLTKKRAV SYELADNVHH CSAITTRSLV  360
QKKADPDFVI LDCEVDSEVP IILRRPFLGT GSVLIDLRAN ELLFWLNDEV VHFDVCKSMK  420
QPRDMNVFSI DDVYDEDEKE LSVEKQLTVE SLYDVLLNSE RKEAEEHEET VCALIGIRSY  480
SHVPKKLDLD LKNQPSPTVK TSIEEPPWLE LKELPRYVFL GIENTLPVSV ADDLSEQHVE  540
DLISALKRYK RAMGWTINDI IGVPPGIFMH KSHLKGDCMP TNSSLIDLKP GGFPDHVSAN  600
IFKYPKSMPS FTTSESIFQA KRMHQVLLVS TKAEFILDTL LRFHLLAEFD DGKQSCRKHL  660
PGHNERQRKP HIGMHSGYKL FLSFAIKVVL NFAYCSFTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-10	SBP family protein