PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33877.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 394aa MW: 44491.1 Da PI: 7.5896

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.3	1.3e-52	5	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yL++kv++k++++ e ik++diyk++PwdLpk ++ +ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PHT33877.1 5 MLPGFRFHPTDEELVGFYLRRKVQQKPISI-ELIKQLDIYKYDPWDLPKLAAVGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGSK 102 579*************************.89***********8778899***********************************95667 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfykgra kg ktdW+mhe+rl PHT33877.1 103 CIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 132 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDEVMLPGFR FHPTDEELVG FYLRRKVQQK PISIELIKQL DIYKYDPWDL PKLAAVGEKE 60 WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL VFYKGRAAKG 120 IKTDWMMHEF RLPSITDSTA PKRFLDKHIP PNDSWAICRI FKKANSNAHR ALSHSWVSPP 180 LPQAQSNTTL SHDFLASSHF CNSDEMSLFI HKTNTTSPIQ FNDLQNSSNN LASFSTLDLP 240 LYKTLNSISS YNNKPPQQLS ISNHHDPITT SYTFSSSCVE NMNNIDASSL LLNMSSSIFG 300 DYSIALPESM EGGGVHEETI TALKEANNVI NNMEHMEEQW GNVVRSNIGV LPLVNNFPLN 360 VAADAWKTNL LWDSSSPCPS SEMSTSYSTN KCYT

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDEVMLPGFR FHPTDEELVG FYLRRKVQQK PISIELIKQL DIYKYDPWDL PKLAAVGEKE  60
WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL VFYKGRAAKG  120
IKTDWMMHEF RLPSITDSTA PKRFLDKHIP PNDSWAICRI FKKANSNAHR ALSHSWVSPP  180
LPQAQSNTTL SHDFLASSHF CNSDEMSLFI HKTNTTSPIQ FNDLQNSSNN LASFSTLDLP  240
LYKTLNSISS YNNKPPQQLS ISNHHDPITT SYTFSSSCVE NMNNIDASSL LLNMSSSIFG  300
DYSIALPESM EGGGVHEETI TALKEANNVI NNMEHMEEQW GNVVRSNIGV LPLVNNFPLN  360
VAADAWKTNL LWDSSSPCPS SEMSTSYSTN KCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-109	NAC family protein