PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33817.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 435aa MW: 48427.7 Da PI: 7.1909

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.6	3.2e-39	105	165	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+++cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++rnvPvG+grrknk+ss PHT33817.1 105 PDKIIPCPRCNSMETKFCYYNNYNVNQPRYFCKNCQRYWTAGGTMRNVPVGSGRRKNKNSS 165 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSEIRDPAIK LFGKTIGMTQ QETNCVHDHH TSASFDNDKI ALGGELTQSK QDDVLVDPTA 60 DSSVEPETSS GISDDLKMQD AEKEILSSKS IEEEDSSEEK TLKKPDKIIP CPRCNSMETK 120 FCYYNNYNVN QPRYFCKNCQ RYWTAGGTMR NVPVGSGRRK NKNSSTSIYP LQAGRVEAAH 180 GMHLPALRTN GTVLTFGSDK PLCDSMASAL NIAENSHNMN RNEYCGSERR MPAIANDQSN 240 GTCSTASSIT DKESNSGPHD LANWRNFQPF SPQVPYFHGA PWPYSGFPVS FYPATPYWGC 300 TVASHWNVPW LSSDQSVHNT SPASPTLGKH SRDESKFDPS QSRRRDATLQ DREGERCVLI 360 PKTLRIHDPN EAAKSSIWST LGIKNEKIHS THGTMLFSSF NPKADLRNHE RDASLLLQAN 420 PAALSRSLKF RESTQ

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSEIRDPAIK LFGKTIGMTQ QETNCVHDHH TSASFDNDKI ALGGELTQSK QDDVLVDPTA  60
DSSVEPETSS GISDDLKMQD AEKEILSSKS IEEEDSSEEK TLKKPDKIIP CPRCNSMETK  120
FCYYNNYNVN QPRYFCKNCQ RYWTAGGTMR NVPVGSGRRK NKNSSTSIYP LQAGRVEAAH  180
GMHLPALRTN GTVLTFGSDK PLCDSMASAL NIAENSHNMN RNEYCGSERR MPAIANDQSN  240
GTCSTASSIT DKESNSGPHD LANWRNFQPF SPQVPYFHGA PWPYSGFPVS FYPATPYWGC  300
TVASHWNVPW LSSDQSVHNT SPASPTLGKH SRDESKFDPS QSRRRDATLQ DREGERCVLI  360
PKTLRIHDPN EAAKSSIWST LGIKNEKIHS THGTMLFSSF NPKADLRNHE RDASLLLQAN  420
PAALSRSLKF RESTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-81	Dof family protein