PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33760.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 350aa MW: 39470.2 Da PI: 6.513

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.9	2.2e-33	21	75	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFv+av+qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl PHT33760.1 21 KPRLKWTPDLHQRFVDAVSQLGGPDKATPKSLMRVMNIHGLTLYHLKSHLQKYRL 75 79****************************************************8 PP
2	Myb_DNA-binding	61.6	1.6e-19	23	74	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++vdav qlGg+ t+k+ +r m+ g+tl+++ks++qky+ PHT33760.1 23 RLKWTPDLHQRFVDAVSQLGGPdkaTPKSLMRVMNiHGLTLYHLKSHLQKYR 74 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MALQNTQQSK DMNLVLSSDA KPRLKWTPDL HQRFVDAVSQ LGGPDKATPK SLMRVMNIHG 60 LTLYHLKSHL QKYRLGKSQV TDQSFDEKKQ EGKLELCTIA HDDDTKENEI SKSLNQRTYF 120 DAESDQLSLG VSCDGSQNQM NESLQIARAL QMQMDVQRKL HQQIEVQRHL QLRIEAQGKY 180 LQSVLRKAQE TLAGYGTSSV GVELAKAELS QLVSMVNMSC CPSTSLSAIT EIDGSISKDT 240 QTKNLKGGIL SSLESSLTSS ESSARKEDQN DTRNNKNTNC IGLSWNQETK ERKRSRNNIC 300 DHDMCVEQPS GKRFLETIDL NSKCPNEYDE NGPKVIDLNY KEVEQFNEYS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MALQNTQQSK DMNLVLSSDA KPRLKWTPDL HQRFVDAVSQ LGGPDKATPK SLMRVMNIHG  60
LTLYHLKSHL QKYRLGKSQV TDQSFDEKKQ EGKLELCTIA HDDDTKENEI SKSLNQRTYF  120
DAESDQLSLG VSCDGSQNQM NESLQIARAL QMQMDVQRKL HQQIEVQRHL QLRIEAQGKY  180
LQSVLRKAQE TLAGYGTSSV GVELAKAELS QLVSMVNMSC CPSTSLSAIT EIDGSISKDT  240
QTKNLKGGIL SSLESSLTSS ESSARKEDQN DTRNNKNTNC IGLSWNQETK ERKRSRNNIC  300
DHDMCVEQPS GKRFLETIDL NSKCPNEYDE NGPKVIDLNY KEVEQFNEYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	4e-79	G2-like family protein