PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33664.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27958.5 Da PI: 7.6575

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.1	3.7e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+nk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifss+gklye++s PHT33664.1 9 KRIDNKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFCS 59 79***********************************************96 PP
2	K-box	98.1	1.3e-32	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +a++++ +qe+ kLk ++e Lq++qRh+lGedL++L+ k+L+qLe+qL++sl++iRs+K++++++q+ el +ke++l e nk+L++klee PHT33664.1 82 QPSADSQNNYQEYLKLKTRVEVLQQSQRHMLGEDLGELNTKDLEQLERQLDSSLRQIRSTKTQHMFDQLAELHQKEQSLTEMNKSLKTKLEE 173 467789***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGKVELKR IDNKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFCSS 60 SSMSKTLERY HKHNYGALEG TQPSADSQNN YQEYLKLKTR VEVLQQSQRH MLGEDLGELN 120 TKDLEQLERQ LDSSLRQIRS TKTQHMFDQL AELHQKEQSL TEMNKSLKTK LEELGVAFQT 180 SWHSGPGEQS VQYRQQQPEG FFQHVDCNNH TVPDMRYGYD NVPPEYAAPS TQDALGVVPG 240 WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	3e-92	MIKC_MADS family protein