PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33391.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 215aa    MW: 23131.7 Da    PI: 8.2619
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.8e-055476123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C++ F ++  L  H++ H
  PHT33391.1 54 YECQYCSREFANSQALGGHQNAH 76
                99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MAELEFRAGT NTSGRLKLFG FNVIEDQEQE VESTKTSSGS PESGDMPTID GRKYECQYCS  60
REFANSQALG GHQNAHKKER QQLKRAQIQA SRNAYMRNPI ISAFAPPSHL LAPPGTLVYP  120
ATGAASTPSW VYVPRGTPPF HVSHGGRGVA NFHYTNGMAE PNLVSVGPQH VKAHGGRVDG  180
SNGPSLNRLS RTDFGPNFDD AFGLDLHLSL APAGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.12e-13C2H2 family protein