PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33349.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 412aa MW: 45367.6 Da PI: 6.0246

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.5e-34	229	283	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGGsekAtPk +l++m+v+gLt++hvkSHLQkYR+ PHT33349.1 229 KPRMRWTPELHEVFVEAVSKLGGSEKATPKGVLKIMNVEGLTIYHVKSHLQKYRT 283 79****************************************************8 PP
2	Myb_DNA-binding	54.1	3.5e-17	231	282	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av +lGg t+k + + m+ +g+t +++ks++qky+ PHT33349.1 231 RMRWTPELHEVFVEAVSKLGGSekaTPKGVLKIMNvEGLTIYHVKSHLQKYR 282 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MNMRRALCIQ RSSEAQHSNM GVSGATSTSS NLIPSQAIPS ASKSRTVGHL LSLTSGPHKD 60 FNFCSTSSQE SRQHNYPFIS SEASAATCRS SLSSIHSTSF DNWPIGNDSN SSGKDAYHDL 120 INFPTNDPVQ NGQVESLAVV MPSDNQAKRS DWQEWADQLI NDDDDDGLGS SWNDILVDIS 180 PPEIKFLKTS ELLACESHIL PSPAAVVAAA SSGQSYPVGS PSSTTALTKP RMRWTPELHE 240 VFVEAVSKLG GSEKATPKGV LKIMNVEGLT IYHVKSHLQK YRTARYKPEP SEGTSEKKST 300 NVIEMPSLDL KTTMGITEAL RLQMEVQKQL HEQLEIQRKL QLRIEEQGKY LEMMFERTKD 360 IGKDFKVSSI ITDEHHSPST EPKHSPPNDK SEALEKDPVS LNDRSITGQE SS

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MNMRRALCIQ RSSEAQHSNM GVSGATSTSS NLIPSQAIPS ASKSRTVGHL LSLTSGPHKD  60
FNFCSTSSQE SRQHNYPFIS SEASAATCRS SLSSIHSTSF DNWPIGNDSN SSGKDAYHDL  120
INFPTNDPVQ NGQVESLAVV MPSDNQAKRS DWQEWADQLI NDDDDDGLGS SWNDILVDIS  180
PPEIKFLKTS ELLACESHIL PSPAAVVAAA SSGQSYPVGS PSSTTALTKP RMRWTPELHE  240
VFVEAVSKLG GSEKATPKGV LKIMNVEGLT IYHVKSHLQK YRTARYKPEP SEGTSEKKST  300
NVIEMPSLDL KTTMGITEAL RLQMEVQKQL HEQLEIQRKL QLRIEEQGKY LEMMFERTKD  360
IGKDFKVSSI ITDEHHSPST EPKHSPPNDK SEALEKDPVS LNDRSITGQE SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	5e-81	G2-like family protein