PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT33157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 269aa MW: 31438.9 Da PI: 6.9085 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.5 | 7.5e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lv++++ +G g+W+t a++ g++Rt+k+c++rw++yl PHT33157.1 14 RGPWTVEEDFILVNYIAHHGEGRWNTLAHCAGLKRTGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.1 | 6.2e-16 | 68 | 110 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PHT33157.1 68 GNITLEEQLLILQLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 110 6779*****************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 269 aa Download sequence |
MDKIRENNIV ELKRGPWTVE EDFILVNYIA HHGEGRWNTL AHCAGLKRTG KSCRLRWLNY 60 LRPDVRHGNI TLEEQLLILQ LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKTLK 120 CDVNSKQFQD TLHYVWIPRL VERIQASKVQ NNNSISVAQQ PVLRTGITEL VPIQLANNSN 180 NNNDNNNSNY LSASVTPENS SVATSSENSI GTTQVSHNQD YYQVNQSDYH HQLWFEDNYQ 240 AMDQQNSIQL WMDNEDVFDN LCNIEDIWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49620.1 | 2e-80 | MYB family protein |