PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32812.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 267aa    MW: 30127.7 Da    PI: 5.9807
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08108155455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ah+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  PHT32812.1 108 AHSLAERVRREKIGERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 155
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MCIKENEFGD SRENSSVCEQ IPIEEIGIKC QNDANSMKGK SIPKRKAREI IAKNENVSTQ  60
NNESSSKRIK CDEKIGSDKE QNEENQKPQE PSKDYIHVRA RRGQATDAHS LAERVRREKI  120
GERMKFLQDL VPGCNKVTGK AVMLDEIINY VQSLQCQVEF LSMKLSNMNP TMDFNAESVT  180
SKNMFQSVGS LHHNMNSSQT SVQEFPYGFQ SQQGPNIQNL DGLVEQTPQV PTFFEDDLHS  240
FIHMGFGQIQ AQNFSGNVST AQMKAEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.16e-60bHLH family protein