PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32805.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 287aa MW: 31633.6 Da PI: 5.8643

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	43.6	6.5e-14	49	80	1	32
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPkti 32 +prlrWt eLHerFv+av+qLGG+++ P+ + PHT32805.1 49 RPRLRWTAELHERFVDAVTQLGGPDRPNPRPL 80 59************************999865 PP
2	Myb_DNA-binding	33.3	1.1e-10	51	76	1	23
TSSS-HHHHHHHHHHHHHTTTT...- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...t 23 r+rWT+e++e++vdav+qlGg+ + PHT32805.1 51 RLRWTAELHERFVDAVTQLGGPdrpN 76 89*******************96552 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MYSGLGMERN GGMGEYHNHH FHHNLQSSIT GEMNNLVGDA CLVLTADHRP RLRWTAELHE 60 RFVDAVTQLG GPDRPNPRPL VKGGTVPSTA PQPMLKYRLG KQSKEVAENY KDESCMAESQ 120 DTSSTASGSS KVVAQDINDC GYQVTEAFRV QMEVQRRLQE QLEVQRHVQL RIEAQGKYLQ 180 TILEKACKAL NYTALESPEL DTAREQLSEL AIKGANANNC DGIVAVSSLP EVVTSFENQN 240 ASDMPATTLV SPTSIGVLKK RPRPLANGDA LPVEDNMTPV QWMMTNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	264	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	3e-62	G2-like family protein