PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT32695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 112aa MW: 13086.6 Da PI: 5.7482 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35 | 3.3e-11 | 3 | 46 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WTt +++ da +++ ++ +W+ Iar++g g++++++k ++ PHT32695.1 3 TWTTKQNKKFEDALALYDKDtpdRWHNIARYVG-GKSAEEVKRHY 46 5********************************.**********9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 112 aa Download sequence |
MATWTTKQNK KFEDALALYD KDTPDRWHNI ARYVGGKSAE EVKRHYELLE KDVMKIENDQ 60 VPLPNYRANA SNGRSNYANE QRLLFWVIFG DEYLNNFYAY TMASSVSLPA EL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75250.1 | 2e-33 | MYB_related family protein |