PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32442.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 269aa    MW: 30239.6 Da    PI: 9.4265
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08184224954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PHT32442.1 184 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYMKFL 224
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDNIDLLKLS SPCEDQMEMM LLMQMENEMP MLDYSPQRNI INNNNNDNID RNNFSEIFDH  60
HNSPSTLFLN NMSSTISLNG CKSPQIVHQD SSITLPFLDN SSSTSGTNGK LRSSIRAANK  120
EQVSSASHLS FPSSHTVKRN SMVAMREMIF RIAAMQPIQI DPASVKAPKR RNVKISSDPQ  180
SVAARHRRER ISEKIRILQR LVPGGTKMDT ASMLDEAIHY MKFLKKQVQS LEKVEVNRPI  240
VAATSGCLGF PVPMSLSGNY YPYHQSVQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-44bHLH family protein