PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT32366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 204aa MW: 23790.2 Da PI: 7.587 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.9 | 2e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rq+ f+kRr+g++KKA ELS+LCd++v v+i+s++g+l+e+ss PHT32366.1 9 KRIEDKSCRQTAFCKRRKGLMKKARELSILCDVDVGVVIISNRGRLHEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 42.9 | 2.1e-15 | 81 | 169 | 11 | 99 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +a+ + + ++++ e Lq++ R+l + ++ ++ +L +Le++L+++l + Rs+K+++lle++++l +ke+ l+eenk L+ +++ PHT32366.1 81 SAEIQVAESKYSRFMPMGELLQETDRQLEETNADDFTVSDLIHLENELQTALIQTRSRKTHMLLESVKHLHEKENLLREENKLLEDNIA 169 5667777888899999999****************************************************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGRRKVEIKR IEDKSCRQTA FCKRRKGLMK KARELSILCD VDVGVVIISN RGRLHEFSST 60 NSLTGILQRY ESHVEAEKEI SAEIQVAESK YSRFMPMGEL LQETDRQLEE TNADDFTVSD 120 LIHLENELQT ALIQTRSRKT HMLLESVKHL HEKENLLREE NKLLEDNIAR IKKNGEVNEM 180 STDFTDLPPR HIICRQQRVT LNFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 8e-40 | MIKC_MADS family protein |