PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32358.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 566aa    MW: 64132.2 Da    PI: 6.3292
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS237.84.7e-731815612374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                 ++lL  cA a+++g+l+++q+l   l+el+s +gd+++Rlaa  ++AL + l+   s+s ++++   ++ +++n +   ++l  f+++sP++++ + +a
  PHT32358.1 181 EQLLNPCAAAITAGNLNRVQHLFYVLQELSSLNGDANHRLAARGLQALTHYLSTpcSTSLISASAGITTFASTNPKFFKNSLINFNDISPWFRIPNSIA 279
                 689**************************************************9755556667778888888888888888888*************** PP

        GRAS  99 NqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgvpfefnvlvak 184
                 N+ Il+ + ++   + +Hi+D+++s+G+QWp+Ll++L+ Rp ++pp +R+T++ +  ++               +   +L  fA+e+++++++n l   
  PHT32358.1 280 NSSILQILLKHdssRNLHILDIGVSHGVQWPTLLEELTHRPgGPPPLVRLTVITPTMENdqqrhnpfvVGPGGYNFTVQLLAFAKEININLQINRLENY 378
                 ******99877666899************************55566*******99766667777777766667788899****************9888 PP

        GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..ns.esFlerflealeyysalfdsleaklp.res 279
                  l++l+ + ++ +p+E l+++ +++lh+l    ++ ++er+e+L+++ksl+Pk +v++e+++d+  ns ++F+++f + +ey ++++ds+++ +  res
  PHT32358.1 379 PLQNLDSQLINSSPDEILVICAQFRLHNLK---HQNPDERTELLRILKSLEPKGLVLSENNMDCscNScSDFATGFGRRVEYLWKFLDSTSVAYKgRES 474
                 *****************************8...66666778********************8875454369*******************887640344 PP

        GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 e r++     ++ e+ +++++ g++    +e++ekW er++++GF    ++ ++ + a++ll+k++ ++++rv+ ++g++ l Wk++p+ ++S W+
  PHT32358.1 475 ERRRM-----MEGEAAKALTNMGEM----NERKEKWCERMRTVGFAWEMFGANVIDRARALLKKYDnNWEMRVDAQDGCVDLWWKGEPVSFCSLWK 561
                 44444.....555699999999998....78888********************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    
MIKHQHQAIL SHYPFSSICN TMTIDETEPD PTFDPISEWL ADPLSYIPSF LDEPYSLDDF  60
YEESWWSPSE SINQEMHINN NNSLTSFDTS LTVTHTSATP LEPIIASHLP PLDSPRKRKG  120
NDSDYNVEAS RKNQNPRIYD TDDGEAIVVQ RVTTRKTAGH KKATHKSTGN NGNNREGRWA  180
EQLLNPCAAA ITAGNLNRVQ HLFYVLQELS SLNGDANHRL AARGLQALTH YLSTPCSTSL  240
ISASAGITTF ASTNPKFFKN SLINFNDISP WFRIPNSIAN SSILQILLKH DSSRNLHILD  300
IGVSHGVQWP TLLEELTHRP GGPPPLVRLT VITPTMENDQ QRHNPFVVGP GGYNFTVQLL  360
AFAKEININL QINRLENYPL QNLDSQLINS SPDEILVICA QFRLHNLKHQ NPDERTELLR  420
ILKSLEPKGL VLSENNMDCS CNSCSDFATG FGRRVEYLWK FLDSTSVAYK GRESERRRMM  480
EGEAAKALTN MGEMNERKEK WCERMRTVGF AWEMFGANVI DRARALLKKY DNNWEMRVDA  540
QDGCVDLWWK GEPVSFCSLW KIDPTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-145GRAS family protein