PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32288.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 585aa MW: 66134.7 Da PI: 9.5834

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	39.9	1.2e-12	472	536	27	97
DUF573 27 gkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++ps+d f+k+ + +k+sk+ql +K+ rLK+K+ k+v + ++fsk+h++k f++s++i g PHT32288.1 472 SAKPSSDYATSLTFAKDDLRMKASKTQLQDKLTRLKRKYLKNVGR------KKFSKPHEKKLFKFSERIVG 536 568999*************************************......89************9966 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MGGGPRTFPG GLTKWQWKRL HEKKARDKEK RLLDHEKQIY QARIRSQIRA KLTTAPEKPE 60 YTPNYGPVSP QDHIRSLADR FMKEGAEDLW NEDDGPIGPG PGPVNTSQPY NQQTNHTINL 120 RKLVTENSNL RDNGFSDIPP SYSFQKVTHF CTNVRNVFAE NPRTGIPVCS GSWSRVGNFP 180 MFGWRMFKTE NRNMNSLNGF LNFRSYSANR KLNFTRNESS ASEDKSNSEG LVVKGDERKA 240 RWPRFRQNAE ESSDEDDDED SEEDEDEGEG GRRSRGSVKM MSSAALGKYD MKTKKRVPLK 300 FVEDEDDLSL HVEAIRKEVK GRSMQKNEIE EDKKESILSS KRFDEYDISP STVKALTEAG 360 YVLMTKVQEA TLSACLEDYL PVSLPCYFIA AIKGQQLPAI ETVLKASSKK SGQRVPPIDV 420 LILCPTRELA SQIAAEANVL LKYHEGIGVQ TLVGGTRFKE DQKRLECNPC QSAKPSSDYA 480 TSLTFAKDDL RMKASKTQLQ DKLTRLKRKY LKNVGRKKFS KPHEKKLFKF SERIVGQVDE 540 VKGKDEVVHK TSEKVIVSAT SSNLVSSGSS VVDFWKIGSK EIHVN

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MGGGPRTFPG GLTKWQWKRL HEKKARDKEK RLLDHEKQIY QARIRSQIRA KLTTAPEKPE  60
YTPNYGPVSP QDHIRSLADR FMKEGAEDLW NEDDGPIGPG PGPVNTSQPY NQQTNHTINL  120
RKLVTENSNL RDNGFSDIPP SYSFQKVTHF CTNVRNVFAE NPRTGIPVCS GSWSRVGNFP  180
MFGWRMFKTE NRNMNSLNGF LNFRSYSANR KLNFTRNESS ASEDKSNSEG LVVKGDERKA  240
RWPRFRQNAE ESSDEDDDED SEEDEDEGEG GRRSRGSVKM MSSAALGKYD MKTKKRVPLK  300
FVEDEDDLSL HVEAIRKEVK GRSMQKNEIE EDKKESILSS KRFDEYDISP STVKALTEAG  360
YVLMTKVQEA TLSACLEDYL PVSLPCYFIA AIKGQQLPAI ETVLKASSKK SGQRVPPIDV  420
LILCPTRELA SQIAAEANVL LKYHEGIGVQ TLVGGTRFKE DQKRLECNPC QSAKPSSDYA  480
TSLTFAKDDL RMKASKTQLQ DKLTRLKRKY LKNVGRKKFS KPHEKKLFKF SERIVGQVDE  540
VKGKDEVVHK TSEKVIVSAT SSNLVSSGSS VVDFWKIGSK EIHVN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	505	518	RLKRKYLKNVGRKK