PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT32015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 162aa MW: 17446.4 Da PI: 5.3129 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 171.6 | 8.6e-54 | 26 | 118 | 2 | 94 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 reqdr+lPian++rimkk+lPan+ki+kd+k+tvqecvsefisf+tseasdkcq+ekrktingddll alatlGfedy+eplkvyl++yre + PHT32015.1 26 REQDRYLPIANIGRIMKKALPANGKIAKDSKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLSALATLGFEDYIEPLKVYLTRYREGD 118 89****************************************************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MAEPASSGGG GSHESGGDPS PQSNLREQDR YLPIANIGRI MKKALPANGK IAKDSKDTVQ 60 ECVSEFISFI TSEASDKCQK EKRKTINGDD LLSALATLGF EDYIEPLKVY LTRYREGDAK 120 GSARVGDASV RKDIVGSQLG SNTQFMYEGS FAQGLNYGNS QI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 1e-69 | NF-YB family protein |