PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31857.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 500aa    MW: 56772.8 Da    PI: 8.8042
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.81.7e-2956139186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+++e+laL+++r+em+ ++r+++lk plW+e+s+km+e g++r++k+C+ek+en+ k++k++k+g+++r  ++ +++++f+qle
  PHT31857.1  56 RWPHEETLALLKIRSEMDLAFRDSNLKSPLWDEISRKMAELGYNRNAKKCREKFENIYKYHKRTKDGRSGR--QNGKNYRFFEQLE 139
                 8********************************************************************98..45567******97 PP
2trihelix97.61.1e-30373458186
    trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k ev aLi++r++ + ++++ g++k+plWe++s+ m++ g+ r++k+Ckekwen+nk+y+++ke++kkr +e+s+tcpyf+ql+
  PHT31857.1 373 RWPKAEVEALIRLRTNADLQYQDnGSSKGPLWEDISSGMKKLGYDRNAKRCKEKWENINKYYRRVKESQKKR-PEDSKTCPYFHQLD 458
                 8*********************7589*********************************************8.99**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MLESSVLLES TATTVVTGGA AGSQAAELKN DGGGGGGGSI GGGSEEDKSY SGGGNRWPHE  60
ETLALLKIRS EMDLAFRDSN LKSPLWDEIS RKMAELGYNR NAKKCREKFE NIYKYHKRTK  120
DGRSGRQNGK NYRFFEQLEL LDSQSLLSSP PSNHMLINRM DAMPVPMPMP MTMIKPATSG  180
CQDFRMDPSQ TRGFNPEFMS TSTSTTSSSG KESNGSVKKK RKLAGYFERL MKEVLDKQED  240
LQNKFLEAIE KCEKDRKARD EAWKMQEMAR LKKEQEALAH ERAISAAKDA AVIAFLQKIS  300
EQTIQLPLPT DLPQVSQRHT EERESTESMK TVGSQENVLQ LDNDKEENTL EKNIDKQEID  360
SAGENSFQMS SSRWPKAEVE ALIRLRTNAD LQYQDNGSSK GPLWEDISSG MKKLGYDRNA  420
KRCKEKWENI NKYYRRVKES QKKRPEDSKT CPYFHQLDSI YQNKSKKQLP ISENPSSNMK  480
ASEILMQIIN QQQQQQQQQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218223KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-70Trihelix family protein