PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT31772.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 582aa MW: 64952.5 Da PI: 4.6241

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT31772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	147.9	5e-46	4	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtd el+++yLk+k+ gkkl + e i+e++iy+v PwdLp k ++k+++ ewyfF++r++kya+g r nrat++gyWk+tgkd+ v+ ++ PHT31772.1 4 LAPGFRFHPTDVELIMYYLKRKIMGKKLLF-EGITELNIYRVSPWDLPdKcCYKSKDLEWYFFCPRERKYASGARMNRATETGYWKTTGKDRLVTY-DE 100 579**********************888.78***********6545666777*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg ktLvf+ g+ p+g++tdWv+he+++ PHT31772.1 101 KIVGSVKTLVFHLGHPPRGQRTDWVIHEFKF 131 9**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MARLAPGFRF HPTDVELIMY YLKRKIMGKK LLFEGITELN IYRVSPWDLP DKCCYKSKDL 60 EWYFFCPRER KYASGARMNR ATETGYWKTT GKDRLVTYDE KIVGSVKTLV FHLGHPPRGQ 120 RTDWVIHEFK FEDKESIDAG FSQDSYVLCK VFQKSGPGPK NGAQYGAPFI EEDWDDDKIP 180 AEPCPLDVFP APPGRPDNRS KSVVTGVVDP GSTSDWPSSE LSLSPIRSSI QRSPLDEPDD 240 EELPGEPKPA NVSPISRMPS DQLDDEGVHG QSNLSNIFSP LPILPEGHCM VKPGPGPSND 300 QMCTNEMPLD EQDDEIFSLL APFTEDTSLL SAGDETKQNL ENFNQDVNAP PATLTDGNDI 360 FAGLGGIEYW AGGGQPGSDL FASDGADYSF NPMILTQDSA YMELNDLDIP LDHSADTIGT 420 GQLVASNFCA PYNSNIGLQQ PCFGSNSMGI VQDFGEHNLP MLPESYTQQV NHSDMVRSCS 480 SSCVEWKLSF LSFSVSLLIG LVNCRFTIFR TTHARVIMLR LISVLALTRN QKRVDSMPKI 540 WKEVDLIFLM TILLGGTSVH VRSVCLRKCD NKNEILDILW WK

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MARLAPGFRF HPTDVELIMY YLKRKIMGKK LLFEGITELN IYRVSPWDLP DKCCYKSKDL  60
EWYFFCPRER KYASGARMNR ATETGYWKTT GKDRLVTYDE KIVGSVKTLV FHLGHPPRGQ  120
RTDWVIHEFK FEDKESIDAG FSQDSYVLCK VFQKSGPGPK NGAQYGAPFI EEDWDDDKIP  180
AEPCPLDVFP APPGRPDNRS KSVVTGVVDP GSTSDWPSSE LSLSPIRSSI QRSPLDEPDD  240
EELPGEPKPA NVSPISRMPS DQLDDEGVHG QSNLSNIFSP LPILPEGHCM VKPGPGPSND  300
QMCTNEMPLD EQDDEIFSLL APFTEDTSLL SAGDETKQNL ENFNQDVNAP PATLTDGNDI  360
FAGLGGIEYW AGGGQPGSDL FASDGADYSF NPMILTQDSA YMELNDLDIP LDHSADTIGT  420
GQLVASNFCA PYNSNIGLQQ PCFGSNSMGI VQDFGEHNLP MLPESYTQQV NHSDMVRSCS  480
SSCVEWKLSF LSFSVSLLIG LVNCRFTIFR TTHARVIMLR LISVLALTRN QKRVDSMPKI  540
WKEVDLIFLM TILLGGTSVH VRSVCLRKCD NKNEILDILW WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	2e-80	NAC family protein