PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31751.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 310aa    MW: 35739.5 Da    PI: 5.5173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72.1e-08163203954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PHT31751.1 163 ARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 203
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDINHIKITT STWEPTMSNM ENHVFHDQQQ QRPCLSSIPN DHVFHDHQQQ QQQFHFEQNP  60
IWPSFPLQNP HHHQLPSSSN QLQEQQQQQQ VPFDHVQTLI EDPNDHEPHE DEDEDEEEEE  120
LGAMKEMMFK IAAMQPVDID PATIRKPKRR NVRISNDPQS VAARLRRERI SEKIRILQRL  180
VPGGTKMDTA SMLDEAIRYV KFLKRQIRLL QSSNHHLPPA QVPVPPCPNN ENWANIATTT  240
KALILGSSST TTTVANNATT FVGNTSSDPT YEFELPTDDR EYENRERENY GNASGGRSGS  300
ERRFDTMSLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164169RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.17e-46bHLH family protein