PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT31575.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 270aa MW: 31619.2 Da PI: 4.4642

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT31575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	74.4	2.7e-23	3	129	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 GfrFhPtdeel+ +yLk+ + ++ l+ ++ik +d+++ +ePw++ + +eek yf s+ ++ +++ k+ + ++ +g+Wk + + +++ + k+ PHT31575.1 3 SLGFRFHPTDEELI-NYLKNFLLHEMLPPRDFIKVADLFEdLEPWEIM--AGSEEKTRYFLSRFKRFKNSTKKFSTTVGKGTWKGQNRGNPIEDGlkKN 98 57**********.9******999999998626*6..45677788999999998888888888999*********9977678 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++ g k++L + + ++++ ++ +W+m+ey l PHT31575.1 99 TTSGYKRSLKYKSDNEKDENNDKWLMKEYFL 129 88******9999999********76 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MLSLGFRFHP TDEELINYLK NFLLHEMLPP RDFIKVADLF EDLEPWEIMA GSEEKTRYFL 60 SRFKRFKNST KKFSTTVGKG TWKGQNRGNP IEDGLKKNTT SGYKRSLKYK SDNEKDENND 120 KWLMKEYFLP DEYFRKSSKS YTFVICKIKE KEKNEKKNKG VISDDVMEEE VDEFIDYVSE 180 SIPDNHQVIT NDDDNQFAVT NEVNYKVMRT NYEASTSCTL HEDDGECRVN YLEDGGVEDF 240 NGIDHLLLGV EDINDENCCI DYDELLEIIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	4e-16	NAC family protein