PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT31471.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 273aa MW: 29999.6 Da PI: 5.3058 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 155.7 | 8e-49 | 41 | 145 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++ w+++ ie+atdfknh+l l+rikki+kadedv+misae+Pvl++kace+fi elt+ swlh++enk rtl+k+diaaa++rtd+fdflvdi+ PHT31471.1 41 QLQMLWNYErqeIEQATDFKNHQLSLSRIKKIMKADEDVRMISAETPVLFAKACEIFIQELTISSWLHTKENKHRTLQKNDIAAAISRTDTFDFLVDII 139 7999999876779************************************************************************************** PP NF-YC 97 prdelk 102 prde+k PHT31471.1 140 PRDEVK 145 ***875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MDNNNNTHQS LAETSTTAAT AAAAAQSAAY PPPYDHVLQQ QLQMLWNYER QEIEQATDFK 60 NHQLSLSRIK KIMKADEDVR MISAETPVLF AKACEIFIQE LTISSWLHTK ENKHRTLQKN 120 DIAAAISRTD TFDFLVDIIP RDEVKDEGVG LGLAPGGVPY YYSPLDQPAP GGVVLGGPAI 180 PGTVPGVVPD VDPSMYVPYM SLQVWQSMWQ TSEDHSYPSG GKSSSGQATD DGQMLPTEQH 240 GLASSHLSEA KRLKSLVRKI PSITYSVQQS TNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 3e-60 | NF-YC family protein |