PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31471.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 273aa    MW: 29999.6 Da    PI: 5.3058
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC155.78e-49411451102
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++ w+++   ie+atdfknh+l l+rikki+kadedv+misae+Pvl++kace+fi elt+ swlh++enk rtl+k+diaaa++rtd+fdflvdi+
  PHT31471.1  41 QLQMLWNYErqeIEQATDFKNHQLSLSRIKKIMKADEDVRMISAETPVLFAKACEIFIQELTISSWLHTKENKHRTLQKNDIAAAISRTDTFDFLVDII 139
                 7999999876779************************************************************************************** PP

       NF-YC  97 prdelk 102
                 prde+k
  PHT31471.1 140 PRDEVK 145
                 ***875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDNNNNTHQS LAETSTTAAT AAAAAQSAAY PPPYDHVLQQ QLQMLWNYER QEIEQATDFK  60
NHQLSLSRIK KIMKADEDVR MISAETPVLF AKACEIFIQE LTISSWLHTK ENKHRTLQKN  120
DIAAAISRTD TFDFLVDIIP RDEVKDEGVG LGLAPGGVPY YYSPLDQPAP GGVVLGGPAI  180
PGTVPGVVPD VDPSMYVPYM SLQVWQSMWQ TSEDHSYPSG GKSSSGQATD DGQMLPTEQH  240
GLASSHLSEA KRLKSLVRKI PSITYSVQQS TNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.13e-60NF-YC family protein