PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT31462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 213aa MW: 24276.9 Da PI: 5.9586 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29 | 2.5e-09 | 18 | 62 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT Ed+++ +a ++ + +W +Ia++++ gRt +++ ++ PHT31462.1 18 TWTRFEDKQFEQALVLYSENdveRWQKIANHVP-GRTVEDVMMHYD 62 7********************************.*******99985 PP | |||||||
2 | Myb_DNA-binding | 44.4 | 3.9e-14 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky PHT31462.1 122 PWTEEEHRLFLIGLDKYGKGDWRSISRNVVVTRTPTQVASHAQKY 166 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MIGDAANNST AMIQSNSTWT RFEDKQFEQA LVLYSENDVE RWQKIANHVP GRTVEDVMMH 60 YDTLVHDVFE IDSGRVEPPS YPDDDGGFGG DWDELDGGKL SQISFGGGAS KKQEVERKKG 120 TPWTEEEHRL FLIGLDKYGK GDWRSISRNV VVTRTPTQVA SHAQKYYLRQ QSMKKERKRS 180 SIHDITTAVD TKMVPPQNSL QNQGAYQNFN FPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 4e-71 | MYB family protein |