PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT31240.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 314aa MW: 36131.4 Da PI: 8.359

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT31240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.2	1.7e-14	163	214	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ PHT31240.1 163 QRMTHIAVERNRRRQMNDYLAILRSLMPPS---YAQRGDQASIVGGAINFVKELE 214 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MALETVVFQQ DPFNYSHKDC TNFYNLENFH DFDHFDFDHG YNWNSPNSSI VQPYHNNNNS 60 SADKFTSSSI AQSYNTNTNT SADKFTSSSI AQSYNTTNNT STDRFTSSSI AQSYNNNNNN 120 SSPEACTGLF PMEYFHEESM MVSGRRKRRR TKCAKNKEEI ENQRMTHIAV ERNRRRQMND 180 YLAILRSLMP PSYAQRGDQA SIVGGAINFV KELEQLLQFL EGHKQVTTKN QCNPFSDFFT 240 FPHHANVKVS SRRRPKQLLK IVNWLQAMCL TILHLSVTTA DPMVLYTFSV KVSICTISKI 300 MSLFLISFIL YDDV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	150	RKRRR
2	146	151	RKRRRT
3	164	175	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-58	bHLH family protein