PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT31192.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 995aa MW: 109219 Da PI: 5.569

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT31192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.1e-29	593	644	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ PHT31192.1 593 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 644 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 995 aa Download sequence
MERGVGFWAF PRGQTEGVST DASTRSTNVE SFNNVMEIMN LDAYAGWCSS PSATDQMFAS 60 YATFSPINQS YAPFEGMSYV DQHTGAFPPM DANMVVSSHD DGGEKMVFGQ NDDDQFHFVV 120 DSGDGGIGLV AERSKKSSQC GADGADMSNS MIVKSPSQPL AERMLRALAM FKESSGAGIL 180 AQVWIPMKND ENQYVLSTCE QPYLLDQALS GYREVSRKFT FDTETKPGAT PGLPGRVFSS 240 RIPEWTSNVL YYKEAEYLRV QYAVNHQVRG SIALPVFEDD ASESPCCAVL ELVTMKEKPN 300 FDLEMDHVCQ ALQAVNLRSI TPPRLDFQNL SNSQREALAE ITDVLRAVCH AHKLPLALTW 360 IPCSVTKGDE SIRVHTRGCN ASLNEKCVLC VEDTTCYVSD KEMQGFVHAC MEHFLEEGEG 420 IVGKALQSNH PFFYPDVKEY HISEYPLVHH ARKCGLNAAV AIRLRSTFTG DDDYILEFFL 480 PISMKGSTEQ QLLLNNLSGT MQRICRSLRT VSDAELVGQG ATFGLQDGSV PCLPPIALSR 540 RNTQHTLDNN SDSVNEAPLG ASNSKSAKMH VVDSCEQTTI RSRRQIEKKR STAEKHVSLS 600 VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ HGISRWPSRK INKVNRSLKK IQTVLESVQG 660 VEGGLKFDPA TGGLVPAGSV IQDSDTRKNI FFPFEDVSVK NPTSVFQDVV SVPSTSANNK 720 ENSMVKMEGD SYIDGNQLSQ SNDINTLSFK GGDKSAVMSK FCYQPNLVAL ESSRPTSLNA 780 NPDSENVSLG SFLAKQGCRR WGLNYDTLDN FDRHFTSRCS FAKAVGGDTD NKIKRDTEID 840 GDGGVIEHNQ ASSSAMTDSS NGSGSMMNGS SSSSRSRGVE KYSMVELNCG DSGSTITVKA 900 TYKEDTIRFK FELSAGCLQL YEEVAKRFKL QTGTFQLKYL DDEAEWVMLV NDADLHECLQ 960 ILDFVGGRTL KFLVRDTPCA MGSSGSSNCF LASGS

Sequence ? help Back to Top

Protein Sequence Length: 995 aa Download sequence

MERGVGFWAF PRGQTEGVST DASTRSTNVE SFNNVMEIMN LDAYAGWCSS PSATDQMFAS  60
YATFSPINQS YAPFEGMSYV DQHTGAFPPM DANMVVSSHD DGGEKMVFGQ NDDDQFHFVV  120
DSGDGGIGLV AERSKKSSQC GADGADMSNS MIVKSPSQPL AERMLRALAM FKESSGAGIL  180
AQVWIPMKND ENQYVLSTCE QPYLLDQALS GYREVSRKFT FDTETKPGAT PGLPGRVFSS  240
RIPEWTSNVL YYKEAEYLRV QYAVNHQVRG SIALPVFEDD ASESPCCAVL ELVTMKEKPN  300
FDLEMDHVCQ ALQAVNLRSI TPPRLDFQNL SNSQREALAE ITDVLRAVCH AHKLPLALTW  360
IPCSVTKGDE SIRVHTRGCN ASLNEKCVLC VEDTTCYVSD KEMQGFVHAC MEHFLEEGEG  420
IVGKALQSNH PFFYPDVKEY HISEYPLVHH ARKCGLNAAV AIRLRSTFTG DDDYILEFFL  480
PISMKGSTEQ QLLLNNLSGT MQRICRSLRT VSDAELVGQG ATFGLQDGSV PCLPPIALSR  540
RNTQHTLDNN SDSVNEAPLG ASNSKSAKMH VVDSCEQTTI RSRRQIEKKR STAEKHVSLS  600
VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ HGISRWPSRK INKVNRSLKK IQTVLESVQG  660
VEGGLKFDPA TGGLVPAGSV IQDSDTRKNI FFPFEDVSVK NPTSVFQDVV SVPSTSANNK  720
ENSMVKMEGD SYIDGNQLSQ SNDINTLSFK GGDKSAVMSK FCYQPNLVAL ESSRPTSLNA  780
NPDSENVSLG SFLAKQGCRR WGLNYDTLDN FDRHFTSRCS FAKAVGGDTD NKIKRDTEID  840
GDGGVIEHNQ ASSSAMTDSS NGSGSMMNGS SSSSRSRGVE KYSMVELNCG DSGSTITVKA  900
TYKEDTIRFK FELSAGCLQL YEEVAKRFKL QTGTFQLKYL DDEAEWVMLV NDADLHECLQ  960
ILDFVGGRTL KFLVRDTPCA MGSSGSSNCF LASGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein