PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT31057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 171aa MW: 19927 Da PI: 9.7798 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 34 | 85 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr ++ +g+++AeIrd + ng +r++lg+f+taeeAa +++a+ +++g+ PHT31057.1 34 HYIGVRKRP-WGKYAAEIRDSTRNG--RRVWLGTFDTAEEAALTYDQAAFCMRGP 85 799******.**********44465..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MDLKIQDHEE LISIKVEVES FSQDSIISKE LEKHYIGVRK RPWGKYAAEI RDSTRNGRRV 60 WLGTFDTAEE AALTYDQAAF CMRGPSTCLN FSVEKVRESL TKMEFNNDFK DGLLLSPAAA 120 IKDRHKKRNS TSRKKKQVNI KEENVLIFED LGFCLRKMMK YSRLVLLVYR V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 135 | KDRHKKRNSTSRKK |
2 | 124 | 137 | KDRHKKRNSTSRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-46 | ERF family protein |