PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31035.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 248aa    MW: 27223.4 Da    PI: 6.2379
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.001195117123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C + F ++  L  H++ H
  PHT31035.1  95 FSCNFCQRKFYSSQALGGHQNAH 117
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MQTPRFNLEV EALFEDDSDI TSQVASNVCV GETFADPSKN SVIDFTQLNS EPVSLDLSLN  60
QDSIGGFSVS STSESSNELA TTQTSVSGPG FQRVFSCNFC QRKFYSSQAL GGHQNAHKRE  120
RILAKRAMRM GVFSGRYANL ATLPLHGSTI RSLGIKAHAS LHQVSAPAIR PLDFKTSARF  180
EYDNRQSPPL YMENDVADQL VLWPGSFRQV TNPSTSHTNF ALPGCSNVTL TPYVEKDEPI  240
APDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.14e-39C2H2 family protein