PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31025.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 178aa    MW: 21026.3 Da    PI: 4.1968
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox437.8e-1428701052
                HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
    Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52
                + ++ Lee F+k + p  + +e+L+++l+L+ +q+k+WF N+R
  PHT31025.1 28 QAINKLEEIFRKMSVPEDHVIEQLSDELELDPTQIKIWFDNKR 70
                6799**************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MASQDDENLV PNSDQENEKS IYRYSYEQAI NKLEEIFRKM SVPEDHVIEQ LSDELELDPT  60
QIKIWFDNKR CDIQVQRDME ERGILRLENE RLHAENLQMY SELNKRICAN CNNAEQKRKI  120
LQELQNEKDR LTEEITRMSN MVAHFEDDSD NDPNGIALEL RLECNDDPNG PDLELRLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.18e-21HD-ZIP family protein