PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT30801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 326aa MW: 36461.8 Da PI: 7.6623 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.1 | 3e-31 | 62 | 115 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +rlrWtp+LH rFv+a+e+LGG+++AtPk il++m+++gL+++hvkSHLQ+YR+ PHT30801.1 62 ARLRWTPDLHLRFVHAMERLGGQDRATPKLILQMMNINGLSIAHVKSHLQMYRS 115 69***************************************************7 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.7e-16 | 63 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+a ++lGg t+k+I ++m+ +g++ ++ks++q+y+ PHT30801.1 63 RLRWTPDLHLRFVHAMERLGGQdraTPKLILQMMNiNGLSIAHVKSHLQMYR 114 89************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 326 aa Download sequence |
MLEDSDETGC NSKTGSNFKK NEDETEENGS SKFKDGGSSS DSTLEESEKK PYVRPYVRSK 60 MARLRWTPDL HLRFVHAMER LGGQDRATPK LILQMMNING LSIAHVKSHL QMYRSKKMDG 120 QSQGIGHHHK LFMEGGDPNI FNLIRFPMFP AYYQRLNSTF RYGDASWNCH GNWMPTMGQT 180 TLTGTGRGLY TTLNHLCTRI PSFPEIKDVL GSSRGNPSDD LTRLFNIAAK SQARAFDGNG 240 IASSPDLERA ITPLKRKVSE CDLDLNLHLG VRPRIEESTN YDDNDNGSSL SLSLSSSRAT 300 RFIEDANIDA TTENARRGTS TLDLTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38300.1 | 3e-53 | G2-like family protein |