PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30467.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 317aa    MW: 34598.1 Da    PI: 5.374
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.31e-16141187455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  PHT30467.1 141 VHNLSEKRRRSRINEKLKALQTLIPNS-----NKTDKASMLDEAIEYLKQLQ 187
                 6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MADPYRTNLH ASSSLDSEDM SSFFLNFLQG SSTSASASAS GSATGYYHRS APVPVAESSS  60
SLNFSDPSRF YSAEFKDGVE NVFASTGLGD CDGMNSENRR EFLEDDKVDN FGFSSEECDG  120
LDMPSNQTHP RSSKRSRSAE VHNLSEKRRR SRINEKLKAL QTLIPNSNKT DKASMLDEAI  180
EYLKQLQLQV QMLTLRNGLS LYPGYVPGSL QSMPLPSGNE FDGRSFMLST NGGATLPLTR  240
EMPQTAFEIS NQNPSGKPTI TSHNAENAVP LETTIQNHYG LLNHLASSKD MCRDNTLSRL  300
HLDMSCSGNN SSSGVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-36bHLH family protein