PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30433.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 382aa MW: 44672.1 Da PI: 8.0947

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.5e-32	79	132	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ PHT30433.1 79 PRLRWTPELHRSFVHAIQRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 132 8****************************************************7 PP
2	Myb_DNA-binding	48.4	2.2e-15	80	131	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+a+++lGg t+k++ ++m+ g++ ++ks++q+y+ PHT30433.1 80 RLRWTPELHRSFVHAIQRLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 131 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MAENLVKQDH EEMMMIMENS SSSSIDLNED NKGESEEEEE EEVIEVEDCS EKETERISNY 60 NSCDVEKKNV RQYVRSKLPR LRWTPELHRS FVHAIQRLGG QERATPKLVL QMMNVRGLSI 120 AHVKSHLQMY RSKKLDESGQ VLGRGNNRGV QGRGYFFRNH LGGQRYNPIQ DFKMRNGAIV 180 LARNFNYDDH ALKGHFRNSF SRPPYQSKGI ISRYMQWSSD NQGGLYNTTK SLQGEDLLRM 240 KSWQTPRQAV IEENGIHEIV PIRSTQFLEQ KKWPPFIPNQ WEEKRADFCS AKNSHFLLQQ 300 NLGQPYSKWK YSRNNNALEQ NLVTPFTFEM KQDKSPLEEK DWLPDLQLRL SRSTEDKNES 360 NRRDQSDINT MLSLSLPTYS AT

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MAENLVKQDH EEMMMIMENS SSSSIDLNED NKGESEEEEE EEVIEVEDCS EKETERISNY  60
NSCDVEKKNV RQYVRSKLPR LRWTPELHRS FVHAIQRLGG QERATPKLVL QMMNVRGLSI  120
AHVKSHLQMY RSKKLDESGQ VLGRGNNRGV QGRGYFFRNH LGGQRYNPIQ DFKMRNGAIV  180
LARNFNYDDH ALKGHFRNSF SRPPYQSKGI ISRYMQWSSD NQGGLYNTTK SLQGEDLLRM  240
KSWQTPRQAV IEENGIHEIV PIRSTQFLEQ KKWPPFIPNQ WEEKRADFCS AKNSHFLLQQ  300
NLGQPYSKWK YSRNNNALEQ NLVTPFTFEM KQDKSPLEEK DWLPDLQLRL SRSTEDKNES  360
NRRDQSDINT MLSLSLPTYS AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-35	G2-like family protein