PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT30282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 225aa MW: 26209.4 Da PI: 8.433 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 52 | 2.4e-16 | 7 | 114 | 33 | 128 |
NAM 33 vikevdiykv..ePwdLpk.....kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgekt. 119 i+++d+y + Pw+L k + k++++++ yfF++ +kk+ +g++ nr ++ g Wk +ke+++k+g+++g k+t+ f + r+ + ++t PHT30282.1 7 DIRHIDLYGIkkPPWELFKgllrsEGKTGTDQLnYFFTPLKKKSVKGRNFNRtIAGVGQWKGRDISKEIYDKEGSVIGSKRTFRFDeeSSRSDNNQRTv 105 4888998866438****74456543233333446******************66779****************************94423444445543 PP NAM 120 dWvmheyrl 128 W+m+ey+l PHT30282.1 106 YWIMKEYSL 114 8******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MPIECHDIRH IDLYGIKKPP WELFKGLLRS EGKTGTDQLN YFFTPLKKKS VKGRNFNRTI 60 AGVGQWKGRD ISKEIYDKEG SVIGSKRTFR FDEESSRSDN NQRTVYWIMK EYSLDETIVD 120 KLRQRDEIQK EDYVVCSIMR KVSSRKNSQD VPSKAENEVS NHHHRDNVPS SSAETCRPWP 180 YHDAAEIRSL PPLDGPFRSL NEEDLALFEK PDPGYPQAYQ NKKLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.1 | 9e-12 | NAC family protein |