PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT30232.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 165aa MW: 19213.9 Da PI: 8.6037 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.5 | 1.9e-17 | 10 | 65 | 51 | 107 |
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLv 107 v+++++ew fF+++d+ky++ +r nrat++gyWk+tg+d+++++kkg+++g+kktL PHT30232.1 10 VESNDNEW-FFCPKDHKYQNRQRLNRATERGYWKTTGEDRNITTKKGAKIGMKKTLL 65 44555555.99********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MIEWLQISVV ESNDNEWFFC PKDHKYQNRQ RLNRATERGY WKTTGEDRNI TTKKGAKIGM 60 KKTLLIPNLN RLAKCPTFSG SILLDYIKSA LTINAEYNSC LDVQINEFYP KHLPMTTTYP 120 VYSHIVGRSD LKQDEHVENP NLDVEQNASL PNHLPKMNCQ RESLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 4e-18 | NAC family protein |