PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30170.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 505aa    MW: 55824.6 Da    PI: 4.7924
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.51.6e-36211132103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y++++d+++++++sws+n+nsfvv++  efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g k+ll++i 
    PHT30170.1  21 FLCKTYDMVDDPSTDSVVSWSKNSNSFVVWNVPEFARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGYKHLLKSIS 108
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k +
    PHT30170.1 109 RRKAS 113
                   **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    
MDGVHEAAAA AAAGGNSPPP FLCKTYDMVD DPSTDSVVSW SKNSNSFVVW NVPEFARDIL  60
PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGY KHLLKSISRR KASQVLGHQQ  120
TTSQVPNASV ASCVEVGKFG IDEEVERLKR DKDVLMQELV KLRQQQQETD HQLQTVGQRV  180
QLMENRQQQM MSFLAKAMQS PGFVAQLVHQ QNGNNRRITG LNKKRRLPEQ DDENVECKPN  240
NVLPDGQVVR YQPSMNEAAK ALMQQILKIN APGRLDNRFK NSNGFLTNNP LPPKNPLDSC  300
GTSSCISGVT LSEVLPTSSQ SHLISDSGFP FNSCSSAMSV TQSSITVVPG EAKAPALPES  360
DALNSQAVHD LPEFYQGQRI NRLDTLGIAD LKMSETGNEP DIDTTQGILD GLTTVVPDGF  420
LADTDGDVLQ DEMPKLPAIN DIFWDHILSA SPLPGDTDEI GSLAVEDGLD KEEDFLGVQE  480
SDWDKLKHMH NLTEQMGLLS SVAQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.21e-126HSF family protein