PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29884.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 409aa MW: 45827.5 Da PI: 5.1584

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.3	5.2e-52	31	158	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yL++k+ +k++++ ++++e+d+yk+ePw+L + ++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v + k+ PHT29884.1 31 LAPGFRFHPTDEELVRYYLRRKACAKPFRF-QAVAEIDVYKSEPWELAEysSLKTRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRPVRH-KS 127 579***********************99.88**********84346777888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf++grap+g++t+Wvmheyrl PHT29884.1 128 QTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 158 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MEQEGALVLV PAAVVATPNR VVPPPPPPTS LAPGFRFHPT DEELVRYYLR RKACAKPFRF 60 QAVAEIDVYK SEPWELAEYS SLKTRDLEWY FFSPVDRKYG NGSRLNRATG KGYWKATGKD 120 RPVRHKSQTI GMKKTLVFHS GRAPDGKRTN WVMHEYRLAD EELERAGVVQ DAFVLCRIFQ 180 KSGLGPPNGD RYAPFIEEEW DDDTALMVPG GEAEDDVGNG DEAQVEGHDL DQLAVGSSKQ 240 DALGKAPCQS ENLAEPRPLT FVCKRERSEE LEPLSLAQSK RSKHDDPSSS HANGSEDSTT 300 SQQDPPTLMM TTSYSPALLT FPLLEPPEPK ESQPSNPLTF DSSNLEKSVP PGYLRFISNL 360 ENQILNVSME KETARIEVMR AQAMINVLQS RIDLLNKENE DLRKLVRNG

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MEQEGALVLV PAAVVATPNR VVPPPPPPTS LAPGFRFHPT DEELVRYYLR RKACAKPFRF  60
QAVAEIDVYK SEPWELAEYS SLKTRDLEWY FFSPVDRKYG NGSRLNRATG KGYWKATGKD  120
RPVRHKSQTI GMKKTLVFHS GRAPDGKRTN WVMHEYRLAD EELERAGVVQ DAFVLCRIFQ  180
KSGLGPPNGD RYAPFIEEEW DDDTALMVPG GEAEDDVGNG DEAQVEGHDL DQLAVGSSKQ  240
DALGKAPCQS ENLAEPRPLT FVCKRERSEE LEPLSLAQSK RSKHDDPSSS HANGSEDSTT  300
SQQDPPTLMM TTSYSPALLT FPLLEPPEPK ESQPSNPLTF DSSNLEKSVP PGYLRFISNL  360
ENQILNVSME KETARIEVMR AQAMINVLQS RIDLLNKENE DLRKLVRNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	3e-97	NAC family protein