PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29794.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 435aa MW: 49151.6 Da PI: 4.837

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.2	4.1e-33	55	194	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWk 84 lp+G++F+Ptd+e+++ +L kveg + +++ +i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W+ PHT29794.1 55 LPRGVKFDPTDQEIIW-HLLGKVEGGNrnshpfIDE--FIPTVNeddgICYTHPQNLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRKIHgdnygDVRWH 149 799**********5.5667777766577544222..3444422345******.677888899**************85555555778 PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +tg++k+v+ +g + g+kk++v+y ++ k+ekt+Wvmh+y+l PHT29794.1 150 KTGRTKPVII-DGIQRGCKKIMVLYisPAKGGKAEKTNWVMHQYHL 194 ********.99********5534667778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
CRPSWLVDSK RIATKIKSAS GDPGTVNWKS NPTKACPKCQ FVIDNNDVSH DWPGLPRGVK 60 FDPTDQEIIW HLLGKVEGGN RNSHPFIDEF IPTVNEDDGI CYTHPQNLPG VKQDGSVSHF 120 FHRAIKAYNT GTRKRRKIHG DNYGDVRWHK TGRTKPVIID GIQRGCKKIM VLYISPAKGG 180 KAEKTNWVMH QYHLGTGEDE REGEYVVSKV FYQQQQQVKQ GEKNEQEFPE DSECLVAKVD 240 PHTPKSVTPE PPRVERLSSS VDARQEIAAS IISPIGQCHE VEDYIENDMR ALPEQTENQD 300 QVIENQIDET GTKVETEAGD DPKWWDSESQ YLLDSQQLVE GLSLCDDLLA SQSPNRDGNE 360 NDKVPNCKPK LADYARLGPE DLKKDLEECQ QFVLDPANIE MDTPPDFRLS QLEFGSQDSY 420 IAWGGNKYGF DSQNL

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

CRPSWLVDSK RIATKIKSAS GDPGTVNWKS NPTKACPKCQ FVIDNNDVSH DWPGLPRGVK  60
FDPTDQEIIW HLLGKVEGGN RNSHPFIDEF IPTVNEDDGI CYTHPQNLPG VKQDGSVSHF  120
FHRAIKAYNT GTRKRRKIHG DNYGDVRWHK TGRTKPVIID GIQRGCKKIM VLYISPAKGG  180
KAEKTNWVMH QYHLGTGEDE REGEYVVSKV FYQQQQQVKQ GEKNEQEFPE DSECLVAKVD  240
PHTPKSVTPE PPRVERLSSS VDARQEIAAS IISPIGQCHE VEDYIENDMR ALPEQTENQD  300
QVIENQIDET GTKVETEAGD DPKWWDSESQ YLLDSQQLVE GLSLCDDLLA SQSPNRDGNE  360
NDKVPNCKPK LADYARLGPE DLKKDLEECQ QFVLDPANIE MDTPPDFRLS QLEFGSQDSY  420
IAWGGNKYGF DSQNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-167	NAC family protein