PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29583.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 421aa    MW: 47142.1 Da    PI: 4.3251
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194796255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  PHT29583.1 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MARKRRASEA LGEKTRDDHQ GNVSWDEMVK EAAAATALGG ARRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPCSPSS STTPALPSKI  120
TNLLISRLKA RNNSLAAAAA TASSSSSDSS VPVAENHDQD KQGEEFREEE EAYFSDFQYM  180
EYLKEPEDLI TDNNMIGNMS AINVTSFTNT LEECLTENDY SVIQPVKIDE NSIGVEMNNT  240
VEVDGEEEIE DGNNTDIGDI VEPIDFQFVD EIGSSCYYSP FEIADEINSS ETMEQGMIYG  300
DESSMLTEAM RRMNYERKFS ASLYAFNGIT ECLKLKLKSG GVMQRERSEQ LSRLRNACKR  360
NRNEEEEKKI HEGGINEKKD TEYISESSAS SSSTITEETN YDSELLLWSS IDLPPICAFV  420
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-21ERF family protein